diff --git a/tools/applypatch/Android.mk b/tools/applypatch/Android.mk
index fe317ff..9a6d2be 100644
--- a/tools/applypatch/Android.mk
+++ b/tools/applypatch/Android.mk
@@ -17,7 +17,7 @@
 LOCAL_PATH := $(call my-dir)
 include $(CLEAR_VARS)
 
-LOCAL_SRC_FILES := applypatch.c bsdiff.c freecache.c imgpatch.c
+LOCAL_SRC_FILES := applypatch.c bsdiff.c freecache.c imgpatch.c utils.c
 LOCAL_MODULE := libapplypatch
 LOCAL_MODULE_TAGS := eng
 LOCAL_C_INCLUDES += external/bzip2 external/zlib bootable/recovery
@@ -39,7 +39,7 @@
 
 include $(CLEAR_VARS)
 
-LOCAL_SRC_FILES := imgdiff.c
+LOCAL_SRC_FILES := imgdiff.c utils.c
 LOCAL_MODULE := imgdiff
 LOCAL_FORCE_STATIC_EXECUTABLE := true
 LOCAL_MODULE_TAGS := eng
diff --git a/tools/applypatch/applypatch.c b/tools/applypatch/applypatch.c
index 185d3de..06089ea 100644
--- a/tools/applypatch/applypatch.c
+++ b/tools/applypatch/applypatch.c
@@ -765,7 +765,8 @@
       return result;
     }
   } else if (header_bytes_read >= 8 &&
-             memcmp(header, "IMGDIFF1", 8) == 0) {
+             memcmp(header, "IMGDIFF", 7) == 0 &&
+             (header[7] == '1' || header[7] == '2')) {
     int result = ApplyImagePatch(source_to_use->data, source_to_use->size,
                                  patch_filename, output, &ctx);
     if (result != 0) {
@@ -773,7 +774,7 @@
       return result;
     }
   } else {
-    fprintf(stderr, "Unknown patch file format");
+    fprintf(stderr, "Unknown patch file format\n");
     return 1;
   }
 
diff --git a/tools/applypatch/imgdiff.c b/tools/applypatch/imgdiff.c
index 6d610e6..51835b4 100644
--- a/tools/applypatch/imgdiff.c
+++ b/tools/applypatch/imgdiff.c
@@ -64,11 +64,15 @@
  *    "IMGDIFF1"                  (8)   [magic number and version]
  *    chunk count                 (4)
  *    for each chunk:
- *        chunk type              (4)   [CHUNK_NORMAL or CHUNK_GZIP]
- *        source start            (8)
- *        source len              (8)
- *        bsdiff patch offset     (8)   [from start of patch file]
- *        if chunk type == CHUNK_GZIP:
+ *        chunk type              (4)   [CHUNK_{NORMAL, GZIP, DEFLATE, RAW}]
+ *        if chunk type == CHUNK_NORMAL:
+ *           source start         (8)
+ *           source len           (8)
+ *           bsdiff patch offset  (8)   [from start of patch file]
+ *        if chunk type == CHUNK_GZIP:      (version 1 only)
+ *           source start         (8)
+ *           source len           (8)
+ *           bsdiff patch offset  (8)   [from start of patch file]
  *           source expanded len  (8)   [size of uncompressed source]
  *           target expected len  (8)   [size of uncompressed target]
  *           gzip level           (4)
@@ -79,6 +83,20 @@
  *           gzip header len      (4)
  *           gzip header          (gzip header len)
  *           gzip footer          (8)
+ *        if chunk type == CHUNK_DEFLATE:   (version 2 only)
+ *           source start         (8)
+ *           source len           (8)
+ *           bsdiff patch offset  (8)   [from start of patch file]
+ *           source expanded len  (8)   [size of uncompressed source]
+ *           target expected len  (8)   [size of uncompressed target]
+ *           gzip level           (4)
+ *                method          (4)
+ *                windowBits      (4)
+ *                memLevel        (4)
+ *                strategy        (4)
+ *        if chunk type == RAW:             (version 2 only)
+ *           target len           (4)
+ *           data                 (target len)
  *
  * All integers are little-endian.  "source start" and "source len"
  * specify the section of the input image that comprises this chunk,
@@ -104,29 +122,230 @@
 
 #include "zlib.h"
 #include "imgdiff.h"
+#include "utils.h"
 
 typedef struct {
-  int type;             // CHUNK_NORMAL or CHUNK_GZIP
+  int type;             // CHUNK_NORMAL, CHUNK_DEFLATE
   size_t start;         // offset of chunk in original image file
 
   size_t len;
-  unsigned char* data;  // data to be patched (ie, uncompressed, for
-                        // gzip chunks)
+  unsigned char* data;  // data to be patched (uncompressed, for deflate chunks)
 
-  // everything else is for CHUNK_GZIP chunks only:
+  size_t source_start;
+  size_t source_len;
 
-  size_t gzip_header_len;
-  unsigned char* gzip_header;
-  unsigned char* gzip_footer;
+  // --- for CHUNK_DEFLATE chunks only: ---
 
-  // original (compressed) gzip data, including header and footer
-  size_t gzip_len;
-  unsigned char* gzip_data;
+  // original (compressed) deflate data
+  size_t deflate_len;
+  unsigned char* deflate_data;
+
+  char* filename;       // used for zip entries
 
   // deflate encoder parameters
   int level, method, windowBits, memLevel, strategy;
+
+  size_t source_uncompressed_len;
 } ImageChunk;
 
+typedef struct {
+  int data_offset;
+  int deflate_len;
+  int uncomp_len;
+  char* filename;
+} ZipFileEntry;
+
+static int fileentry_compare(const void* a, const void* b) {
+  int ao = ((ZipFileEntry*)a)->data_offset;
+  int bo = ((ZipFileEntry*)b)->data_offset;
+  if (ao < bo) {
+    return -1;
+  } else if (ao > bo) {
+    return 1;
+  } else {
+    return 0;
+  }
+}
+
+unsigned char* ReadZip(const char* filename,
+                       int* num_chunks, ImageChunk** chunks,
+                       int include_pseudo_chunk) {
+  struct stat st;
+  if (stat(filename, &st) != 0) {
+    fprintf(stderr, "failed to stat \"%s\": %s\n", filename, strerror(errno));
+    return NULL;
+  }
+
+  unsigned char* img = malloc(st.st_size);
+  FILE* f = fopen(filename, "rb");
+  if (fread(img, 1, st.st_size, f) != st.st_size) {
+    fprintf(stderr, "failed to read \"%s\" %s\n", filename, strerror(errno));
+    fclose(f);
+    return NULL;
+  }
+  fclose(f);
+
+  // look for the end-of-central-directory record.
+
+  int i;
+  for (i = st.st_size-20; i >= 0 && i > st.st_size - 65600; --i) {
+    if (img[i] == 0x50 && img[i+1] == 0x4b &&
+        img[i+2] == 0x05 && img[i+3] == 0x06) {
+      break;
+    }
+  }
+  // double-check: this archive consists of a single "disk"
+  if (!(img[i+4] == 0 && img[i+5] == 0 && img[i+6] == 0 && img[i+7] == 0)) {
+    fprintf(stderr, "can't process multi-disk archive\n");
+    return NULL;
+  }
+
+  int cdcount = Read2(img+i+8);
+  int cdoffset = Read4(img+i+16);
+
+  ZipFileEntry* temp_entries = malloc(cdcount * sizeof(ZipFileEntry));
+  int entrycount = 0;
+
+  unsigned char* cd = img+cdoffset;
+  for (i = 0; i < cdcount; ++i) {
+    if (!(cd[0] == 0x50 && cd[1] == 0x4b && cd[2] == 0x01 && cd[3] == 0x02)) {
+      fprintf(stderr, "bad central directory entry %d\n", i);
+      return NULL;
+    }
+
+    int clen = Read4(cd+20);   // compressed len
+    int ulen = Read4(cd+24);   // uncompressed len
+    int nlen = Read2(cd+28);   // filename len
+    int xlen = Read2(cd+30);   // extra field len
+    int mlen = Read2(cd+32);   // file comment len
+    int hoffset = Read4(cd+42);   // local header offset
+
+    char* filename = malloc(nlen+1);
+    memcpy(filename, cd+46, nlen);
+    filename[nlen] = '\0';
+
+    int method = Read2(cd+10);
+
+    cd += 46 + nlen + xlen + mlen;
+
+    if (method != 8) {  // 8 == deflate
+      free(filename);
+      continue;
+    }
+
+    unsigned char* lh = img + hoffset;
+
+    if (!(lh[0] == 0x50 && lh[1] == 0x4b && lh[2] == 0x03 && lh[3] == 0x04)) {
+      fprintf(stderr, "bad local file header entry %d\n", i);
+      return NULL;
+    }
+
+    if (Read2(lh+26) != nlen || memcmp(lh+30, filename, nlen) != 0) {
+      fprintf(stderr, "central dir filename doesn't match local header\n");
+      return NULL;
+    }
+
+    xlen = Read2(lh+28);   // extra field len; might be different from CD entry?
+
+    temp_entries[entrycount].data_offset = hoffset+30+nlen+xlen;
+    temp_entries[entrycount].deflate_len = clen;
+    temp_entries[entrycount].uncomp_len = ulen;
+    temp_entries[entrycount].filename = filename;
+    ++entrycount;
+  }
+
+  qsort(temp_entries, entrycount, sizeof(ZipFileEntry), fileentry_compare);
+
+#if 0
+  printf("found %d deflated entries\n", entrycount);
+  for (i = 0; i < entrycount; ++i) {
+    printf("off %10d  len %10d unlen %10d   %p %s\n",
+           temp_entries[i].data_offset,
+           temp_entries[i].deflate_len,
+           temp_entries[i].uncomp_len,
+           temp_entries[i].filename,
+           temp_entries[i].filename);
+  }
+#endif
+
+  *num_chunks = 0;
+  *chunks = malloc((entrycount*2+2) * sizeof(ImageChunk));
+  ImageChunk* curr = *chunks;
+
+  if (include_pseudo_chunk) {
+    curr->type = CHUNK_NORMAL;
+    curr->start = 0;
+    curr->len = st.st_size;
+    curr->data = img;
+    curr->filename = NULL;
+    ++curr;
+    ++*num_chunks;
+  }
+
+  int pos = 0;
+  int nextentry = 0;
+
+  while (pos < st.st_size) {
+    if (nextentry < entrycount && pos == temp_entries[nextentry].data_offset) {
+      curr->type = CHUNK_DEFLATE;
+      curr->start = pos;
+      curr->deflate_len = temp_entries[nextentry].deflate_len;
+      curr->deflate_data = img + pos;
+      curr->filename = temp_entries[nextentry].filename;
+
+      curr->len = temp_entries[nextentry].uncomp_len;
+      curr->data = malloc(curr->len);
+
+      z_stream strm;
+      strm.zalloc = Z_NULL;
+      strm.zfree = Z_NULL;
+      strm.opaque = Z_NULL;
+      strm.avail_in = curr->deflate_len;
+      strm.next_in = curr->deflate_data;
+
+      // -15 means we are decoding a 'raw' deflate stream; zlib will
+      // not expect zlib headers.
+      int ret = inflateInit2(&strm, -15);
+
+      strm.avail_out = curr->len;
+      strm.next_out = curr->data;
+      ret = inflate(&strm, Z_NO_FLUSH);
+      if (ret != Z_STREAM_END) {
+        fprintf(stderr, "failed to inflate \"%s\"; %d\n", curr->filename, ret);
+        return NULL;
+      }
+
+      inflateEnd(&strm);
+
+      pos += curr->deflate_len;
+      ++nextentry;
+      ++*num_chunks;
+      ++curr;
+      continue;
+    }
+
+    // use a normal chunk to take all the data up to the start of the
+    // next deflate section.
+
+    curr->type = CHUNK_NORMAL;
+    curr->start = pos;
+    if (nextentry < entrycount) {
+      curr->len = temp_entries[nextentry].data_offset - pos;
+    } else {
+      curr->len = st.st_size - pos;
+    }
+    curr->data = img + pos;
+    curr->filename = NULL;
+    pos += curr->len;
+
+    ++*num_chunks;
+    ++curr;
+  }
+
+  free(temp_entries);
+  return img;
+}
+
 /*
  * Read the given file and break it up into chunks, putting the number
  * of chunks and their info in *num_chunks and **chunks,
@@ -166,38 +385,45 @@
   while (pos < st.st_size) {
     unsigned char* p = img+pos;
 
-    // Reallocate the list for every chunk; we expect the number of
-    // chunks to be small (5 for typical boot and recovery images).
-    ++*num_chunks;
-    *chunks = realloc(*chunks, *num_chunks * sizeof(ImageChunk));
-    ImageChunk* curr = *chunks + (*num_chunks-1);
-    curr->start = pos;
-
     if (st.st_size - pos >= 4 &&
         p[0] == 0x1f && p[1] == 0x8b &&
         p[2] == 0x08 &&    // deflate compression
         p[3] == 0x00) {    // no header flags
       // 'pos' is the offset of the start of a gzip chunk.
 
-      curr->type = CHUNK_GZIP;
-      curr->gzip_header_len = GZIP_HEADER_LEN;
-      curr->gzip_header = p;
+      *num_chunks += 3;
+      *chunks = realloc(*chunks, *num_chunks * sizeof(ImageChunk));
+      ImageChunk* curr = *chunks + (*num_chunks-3);
+
+      // create a normal chunk for the header.
+      curr->start = pos;
+      curr->type = CHUNK_NORMAL;
+      curr->len = GZIP_HEADER_LEN;
+      curr->data = p;
+
+      pos += curr->len;
+      p += curr->len;
+      ++curr;
+
+      curr->type = CHUNK_DEFLATE;
+      curr->filename = NULL;
 
       // We must decompress this chunk in order to discover where it
       // ends, and so we can put the uncompressed data and its length
-      // into curr->data and curr->len;
+      // into curr->data and curr->len.
 
       size_t allocated = 32768;
       curr->len = 0;
       curr->data = malloc(allocated);
-      curr->gzip_data = p;
+      curr->start = pos;
+      curr->deflate_data = p;
 
       z_stream strm;
       strm.zalloc = Z_NULL;
       strm.zfree = Z_NULL;
       strm.opaque = Z_NULL;
-      strm.avail_in = st.st_size - (pos + curr->gzip_header_len);
-      strm.next_in = p + GZIP_HEADER_LEN;
+      strm.avail_in = st.st_size - pos;
+      strm.next_in = p;
 
       // -15 means we are decoding a 'raw' deflate stream; zlib will
       // not expect zlib headers.
@@ -214,27 +440,42 @@
         }
       } while (ret != Z_STREAM_END);
 
-      curr->gzip_len = st.st_size - strm.avail_in - pos + GZIP_FOOTER_LEN;
-      pos = st.st_size - strm.avail_in;
+      curr->deflate_len = st.st_size - strm.avail_in - pos;
       inflateEnd(&strm);
+      pos += curr->deflate_len;
+      p += curr->deflate_len;
+      ++curr;
 
-      // consume the gzip footer.
-      curr->gzip_footer = img+pos;
-      pos += GZIP_FOOTER_LEN;
-      p = img+pos;
+      // create a normal chunk for the footer
+
+      curr->type = CHUNK_NORMAL;
+      curr->start = pos;
+      curr->len = GZIP_FOOTER_LEN;
+      curr->data = img+pos;
+
+      pos += curr->len;
+      p += curr->len;
+      ++curr;
 
       // The footer (that we just skipped over) contains the size of
       // the uncompressed data.  Double-check to make sure that it
       // matches the size of the data we got when we actually did
       // the decompression.
-      size_t footer_size = p[-4] + (p[-3] << 8) + (p[-2] << 16) + (p[-1] << 24);
-      if (footer_size != curr->len) {
+      size_t footer_size = Read4(p-4);
+      if (footer_size != curr[-2].len) {
         fprintf(stderr, "Error: footer size %d != decompressed size %d\n",
-                footer_size, curr->len);
+                footer_size, curr[-2].len);
         free(img);
         return NULL;
       }
     } else {
+      // Reallocate the list for every chunk; we expect the number of
+      // chunks to be small (5 for typical boot and recovery images).
+      ++*num_chunks;
+      *chunks = realloc(*chunks, *num_chunks * sizeof(ImageChunk));
+      ImageChunk* curr = *chunks + (*num_chunks-1);
+      curr->start = pos;
+
       // 'pos' is not the offset of the start of a gzip chunk, so scan
       // forward until we find a gzip header.
       curr->type = CHUNK_NORMAL;
@@ -264,7 +505,13 @@
  * the chunk).  Return 0 on success.
  */
 int TryReconstruction(ImageChunk* chunk, unsigned char* out) {
-  size_t p = chunk->gzip_header_len;
+  size_t p = 0;
+
+#if 0
+  fprintf(stderr, "trying %d %d %d %d %d\n",
+          chunk->level, chunk->method, chunk->windowBits,
+          chunk->memLevel, chunk->strategy);
+#endif
 
   z_stream strm;
   strm.zalloc = Z_NULL;
@@ -281,7 +528,7 @@
     ret = deflate(&strm, Z_FINISH);
     size_t have = BUFFER_SIZE - strm.avail_out;
 
-    if (memcmp(out, chunk->gzip_data+p, have) != 0) {
+    if (memcmp(out, chunk->deflate_data+p, have) != 0) {
       // mismatch; data isn't the same.
       deflateEnd(&strm);
       return -1;
@@ -289,7 +536,7 @@
     p += have;
   } while (ret != Z_STREAM_END);
   deflateEnd(&strm);
-  if (p + GZIP_FOOTER_LEN != chunk->gzip_len) {
+  if (p != chunk->deflate_len) {
     // mismatch; ran out of data before we should have.
     return -1;
   }
@@ -302,9 +549,9 @@
  * strategy fields in the chunk to the encoding parameters needed to
  * produce the right output.  Returns 0 on success.
  */
-int ReconstructGzipChunk(ImageChunk* chunk) {
-  if (chunk->type != CHUNK_GZIP) {
-    fprintf(stderr, "attempt to reconstruct non-gzip chunk\n");
+int ReconstructDeflateChunk(ImageChunk* chunk) {
+  if (chunk->type != CHUNK_DEFLATE) {
+    fprintf(stderr, "attempt to reconstruct non-deflate chunk\n");
     return -1;
   }
 
@@ -329,27 +576,6 @@
   return -1;
 }
 
-/** Write a 4-byte value to f in little-endian order. */
-void Write4(int value, FILE* f) {
-  fputc(value & 0xff, f);
-  fputc((value >> 8) & 0xff, f);
-  fputc((value >> 16) & 0xff, f);
-  fputc((value >> 24) & 0xff, f);
-}
-
-/** Write an 8-byte value to f in little-endian order. */
-void Write8(long long value, FILE* f) {
-  fputc(value & 0xff, f);
-  fputc((value >> 8) & 0xff, f);
-  fputc((value >> 16) & 0xff, f);
-  fputc((value >> 24) & 0xff, f);
-  fputc((value >> 32) & 0xff, f);
-  fputc((value >> 40) & 0xff, f);
-  fputc((value >> 48) & 0xff, f);
-  fputc((value >> 56) & 0xff, f);
-}
-
-
 /*
  * Given source and target chunks, compute a bsdiff patch between them
  * by running bsdiff in a subprocess.  Return the patch data, placing
@@ -357,6 +583,14 @@
  * program to be in the path.
  */
 unsigned char* MakePatch(ImageChunk* src, ImageChunk* tgt, size_t* size) {
+  if (tgt->type == CHUNK_NORMAL) {
+    if (tgt->len <= 160) {
+      tgt->type = CHUNK_RAW;
+      *size = tgt->len;
+      return tgt->data;
+    }
+  }
+
   char stemp[] = "/tmp/imgdiff-src-XXXXXX";
   char ttemp[] = "/tmp/imgdiff-tgt-XXXXXX";
   char ptemp[] = "/tmp/imgdiff-patch-XXXXXX";
@@ -405,6 +639,17 @@
   }
 
   unsigned char* data = malloc(st.st_size);
+
+  if (tgt->type == CHUNK_NORMAL && tgt->len <= st.st_size) {
+    unlink(stemp);
+    unlink(ttemp);
+    unlink(ptemp);
+
+    tgt->type = CHUNK_RAW;
+    *size = tgt->len;
+    return tgt->data;
+  }
+
   *size = st.st_size;
 
   f = fopen(ptemp, "rb");
@@ -422,6 +667,17 @@
   unlink(ttemp);
   unlink(ptemp);
 
+  tgt->source_start = src->start;
+  switch (tgt->type) {
+    case CHUNK_NORMAL:
+      tgt->source_len = src->len;
+      break;
+    case CHUNK_DEFLATE:
+      tgt->source_len = src->deflate_len;
+      tgt->source_uncompressed_len = src->len;
+      break;
+  }
+
   return data;
 }
 
@@ -432,11 +688,12 @@
  * where some gzip chunks are reconstructible but others aren't (by
  * treating the ones that aren't as normal chunks).
  */
-void ChangeGzipChunkToNormal(ImageChunk* ch) {
+void ChangeDeflateChunkToNormal(ImageChunk* ch) {
+  if (ch->type != CHUNK_DEFLATE) return;
   ch->type = CHUNK_NORMAL;
   free(ch->data);
-  ch->data = ch->gzip_data;
-  ch->len = ch->gzip_len;
+  ch->data = ch->deflate_data;
+  ch->len = ch->deflate_len;
 }
 
 /*
@@ -450,9 +707,9 @@
         case CHUNK_NORMAL:
             return a->len == b->len && memcmp(a->data, b->data, a->len) == 0;
 
-        case CHUNK_GZIP:
-            return a->gzip_len == b->gzip_len &&
-                memcmp(a->gzip_data, b->gzip_data, a->gzip_len) == 0;
+        case CHUNK_DEFLATE:
+            return a->deflate_len == b->deflate_len &&
+                memcmp(a->deflate_data, b->deflate_data, a->deflate_len) == 0;
 
         default:
             fprintf(stderr, "unknown chunk type %d\n", a->type);
@@ -462,7 +719,7 @@
 
 /*
  * Look for runs of adjacent normal chunks and compress them down into
- * a single chunk.  (Such runs can be produced when gzip chunks are
+ * a single chunk.  (Such runs can be produced when deflate chunks are
  * changed to normal chunks.)
  */
 void MergeAdjacentNormalChunks(ImageChunk* chunks, int* num_chunks) {
@@ -476,7 +733,7 @@
       // that constitute a solid block of data (ie, each chunk begins
       // where the previous one ended).
       for (in_end = in_start+1;
-           in_end < num_chunks && chunks[in_end].type == CHUNK_NORMAL &&
+           in_end < *num_chunks && chunks[in_end].type == CHUNK_NORMAL &&
              (chunks[in_end].start ==
               chunks[in_end-1].start + chunks[in_end-1].len &&
               chunks[in_end].data ==
@@ -485,11 +742,16 @@
     }
 
     if (in_end == in_start+1) {
+#if 0
+      printf("chunk %d is now %d\n", in_start, out);
+#endif
       if (out != in_start) {
         memcpy(chunks+out, chunks+in_start, sizeof(ImageChunk));
       }
     } else {
-      printf("collapse normal chunks %d - %d\n", in_start, in_end-1);
+#if 0
+      printf("collapse normal chunks %d-%d into %d\n", in_start, in_end-1, out);
+#endif
 
       // Merge chunks [in_start, in_end-1] into one chunk.  Since the
       // data member of each chunk is just a pointer into an in-memory
@@ -510,93 +772,159 @@
   *num_chunks = out;
 }
 
+ImageChunk* FindChunkByName(const char* name,
+                            ImageChunk* chunks, int num_chunks) {
+  int i;
+  for (i = 0; i < num_chunks; ++i) {
+    if (chunks[i].type == CHUNK_DEFLATE && chunks[i].filename &&
+        strcmp(name, chunks[i].filename) == 0) {
+      return chunks+i;
+    }
+  }
+  return NULL;
+}
+
 int main(int argc, char** argv) {
-  if (argc != 4) {
-    fprintf(stderr, "usage: %s <src-img> <tgt-img> <patch-file>\n", argv[0]);
+  if (argc != 4 && argc != 5) {
+    usage:
+    fprintf(stderr, "usage: %s [-z] <src-img> <tgt-img> <patch-file>\n",
+            argv[0]);
     return 2;
   }
 
+  int zip_mode = 0;
+
+  if (strcmp(argv[1], "-z") == 0) {
+    zip_mode = 1;
+    --argc;
+    ++argv;
+  }
+
+
   int num_src_chunks;
   ImageChunk* src_chunks;
-  if (ReadImage(argv[1], &num_src_chunks, &src_chunks) == NULL) {
-    fprintf(stderr, "failed to break apart source image\n");
-    return 1;
-  }
-
   int num_tgt_chunks;
   ImageChunk* tgt_chunks;
-  if (ReadImage(argv[2], &num_tgt_chunks, &tgt_chunks) == NULL) {
-    fprintf(stderr, "failed to break apart target image\n");
-    return 1;
-  }
-
-  // Verify that the source and target images have the same chunk
-  // structure (ie, the same sequence of gzip and normal chunks).
-
-  if (num_src_chunks != num_tgt_chunks) {
-    fprintf(stderr, "source and target don't have same number of chunks!\n");
-    return 1;
-  }
   int i;
-  for (i = 0; i < num_src_chunks; ++i) {
-    if (src_chunks[i].type != tgt_chunks[i].type) {
-      fprintf(stderr, "source and target don't have same chunk "
-              "structure! (chunk %d)\n", i);
+
+  if (zip_mode) {
+    if (ReadZip(argv[1], &num_src_chunks, &src_chunks, 1) == NULL) {
+      fprintf(stderr, "failed to break apart source zip file\n");
       return 1;
     }
+    if (ReadZip(argv[2], &num_tgt_chunks, &tgt_chunks, 0) == NULL) {
+      fprintf(stderr, "failed to break apart target zip file\n");
+      return 1;
+    }
+  } else {
+    if (ReadImage(argv[1], &num_src_chunks, &src_chunks) == NULL) {
+      fprintf(stderr, "failed to break apart source image\n");
+      return 1;
+    }
+    if (ReadImage(argv[2], &num_tgt_chunks, &tgt_chunks) == NULL) {
+      fprintf(stderr, "failed to break apart target image\n");
+      return 1;
+    }
+
+    // Verify that the source and target images have the same chunk
+    // structure (ie, the same sequence of deflate and normal chunks).
+
+    if (num_src_chunks != num_tgt_chunks) {
+      fprintf(stderr, "source and target don't have same number of chunks!\n");
+      return 1;
+    }
+    for (i = 0; i < num_src_chunks; ++i) {
+      if (src_chunks[i].type != tgt_chunks[i].type) {
+        fprintf(stderr, "source and target don't have same chunk "
+                "structure! (chunk %d)\n", i);
+        return 1;
+      }
+    }
   }
 
   for (i = 0; i < num_tgt_chunks; ++i) {
-    if (tgt_chunks[i].type == CHUNK_GZIP) {
+    if (tgt_chunks[i].type == CHUNK_DEFLATE) {
       // Confirm that given the uncompressed chunk data in the target, we
       // can recompress it and get exactly the same bits as are in the
       // input target image.  If this fails, treat the chunk as a normal
-      // non-gzipped chunk.
-      if (ReconstructGzipChunk(tgt_chunks+i) < 0) {
-        printf("failed to reconstruct target gzip chunk %d; "
-               "treating as normal chunk\n", i);
-        ChangeGzipChunkToNormal(tgt_chunks+i);
-        ChangeGzipChunkToNormal(src_chunks+i);
+      // non-deflated chunk.
+      if (ReconstructDeflateChunk(tgt_chunks+i) < 0) {
+        printf("failed to reconstruct target deflate chunk %d [%s]; "
+               "treating as normal\n", i, tgt_chunks[i].filename);
+        ChangeDeflateChunkToNormal(tgt_chunks+i);
+        if (zip_mode) {
+          ImageChunk* src = FindChunkByName(tgt_chunks[i].filename, src_chunks, num_src_chunks);
+          if (src) {
+            ChangeDeflateChunkToNormal(src);
+          }
+        } else {
+          ChangeDeflateChunkToNormal(src_chunks+i);
+        }
         continue;
-      } else {
-        printf("reconstructed target gzip chunk %d\n", i);
       }
 
-      // If two gzip chunks are identical (eg, the kernel has not
+      // If two deflate chunks are identical (eg, the kernel has not
       // changed between two builds), treat them as normal chunks.
       // This makes applypatch much faster -- it can apply a trivial
       // patch to the compressed data, rather than uncompressing and
       // recompressing to apply the trivial patch to the uncompressed
       // data.
-      if (AreChunksEqual(tgt_chunks+i, src_chunks+i)) {
-        printf("source and target chunk %d are identical; "
-               "treating as normal chunk\n", i);
-        ChangeGzipChunkToNormal(tgt_chunks+i);
-        ChangeGzipChunkToNormal(src_chunks+i);
+      ImageChunk* src;
+      if (zip_mode) {
+        src = FindChunkByName(tgt_chunks[i].filename, src_chunks, num_src_chunks);
+      } else {
+        src = src_chunks+i;
+      }
+
+      if (src == NULL || AreChunksEqual(tgt_chunks+i, src)) {
+        ChangeDeflateChunkToNormal(tgt_chunks+i);
+        if (src) {
+          ChangeDeflateChunkToNormal(src);
+        }
       }
     }
   }
 
-  // If we changed any gzip chunks to normal chunks, we can simplify
-  // the patch by merging neighboring normal chunks.
-  MergeAdjacentNormalChunks(src_chunks, &num_src_chunks);
-  MergeAdjacentNormalChunks(tgt_chunks, &num_tgt_chunks);
-  if (num_src_chunks != num_tgt_chunks) {
-    // This shouldn't happen.
-    fprintf(stderr, "merging normal chunks went awry\n");
-    return 1;
+  // Merging neighboring normal chunks.
+  if (zip_mode) {
+    // For zips, we only need to do this to the target:  deflated
+    // chunks are matched via filename, and normal chunks are patched
+    // using the entire source file as the source.
+    MergeAdjacentNormalChunks(tgt_chunks, &num_tgt_chunks);
+  } else {
+    // For images, we need to maintain the parallel structure of the
+    // chunk lists, so do the merging in both the source and target
+    // lists.
+    MergeAdjacentNormalChunks(tgt_chunks, &num_tgt_chunks);
+    MergeAdjacentNormalChunks(src_chunks, &num_src_chunks);
+    if (num_src_chunks != num_tgt_chunks) {
+      // This shouldn't happen.
+      fprintf(stderr, "merging normal chunks went awry\n");
+      return 1;
+    }
   }
 
   // Compute bsdiff patches for each chunk's data (the uncompressed
-  // data, in the case of gzip chunks).
+  // data, in the case of deflate chunks).
 
-  unsigned char** patch_data = malloc(num_src_chunks * sizeof(unsigned char*));
-  size_t* patch_size = malloc(num_src_chunks * sizeof(size_t));
-  for (i = 0; i < num_src_chunks; ++i) {
-    patch_data[i] = MakePatch(src_chunks+i, tgt_chunks+i, patch_size+i);
-    printf("patch %d is %d bytes (of %d)\n", i, patch_size[i],
-           tgt_chunks[i].type == CHUNK_NORMAL ? tgt_chunks[i].len : tgt_chunks[i].gzip_len);
-
+  printf("Construct patches for %d chunks...\n", num_tgt_chunks);
+  unsigned char** patch_data = malloc(num_tgt_chunks * sizeof(unsigned char*));
+  size_t* patch_size = malloc(num_tgt_chunks * sizeof(size_t));
+  for (i = 0; i < num_tgt_chunks; ++i) {
+    if (zip_mode) {
+      ImageChunk* src;
+      if (tgt_chunks[i].type == CHUNK_DEFLATE &&
+          (src = FindChunkByName(tgt_chunks[i].filename, src_chunks,
+                                 num_src_chunks))) {
+        patch_data[i] = MakePatch(src, tgt_chunks+i, patch_size+i);
+      } else {
+        patch_data[i] = MakePatch(src_chunks, tgt_chunks+i, patch_size+i);
+      }
+    } else {
+      patch_data[i] = MakePatch(src_chunks+i, tgt_chunks+i, patch_size+i);
+    }
+    printf("patch %3d is %d bytes (of %d)\n",
+           i, patch_size[i], tgt_chunks[i].source_len);
   }
 
   // Figure out how big the imgdiff file header is going to be, so
@@ -604,10 +932,18 @@
   // within the file.
 
   size_t total_header_size = 12;
-  for (i = 0; i < num_src_chunks; ++i) {
-    total_header_size += 4 + 8*3;
-    if (src_chunks[i].type == CHUNK_GZIP) {
-      total_header_size += 8*2 + 4*6 + tgt_chunks[i].gzip_header_len + 8;
+  for (i = 0; i < num_tgt_chunks; ++i) {
+    total_header_size += 4;
+    switch (tgt_chunks[i].type) {
+      case CHUNK_NORMAL:
+        total_header_size += 8*3;
+        break;
+      case CHUNK_DEFLATE:
+        total_header_size += 8*5 + 4*5;
+        break;
+      case CHUNK_RAW:
+        total_header_size += 4 + patch_size[i];
+        break;
     }
   }
 
@@ -617,35 +953,53 @@
 
   // Write out the headers.
 
-  fwrite("IMGDIFF1", 1, 8, f);
-  Write4(num_src_chunks, f);
+  fwrite("IMGDIFF2", 1, 8, f);
+  Write4(num_tgt_chunks, f);
   for (i = 0; i < num_tgt_chunks; ++i) {
     Write4(tgt_chunks[i].type, f);
-    Write8(src_chunks[i].start, f);
-    Write8(src_chunks[i].type == CHUNK_NORMAL ? src_chunks[i].len :
-           (src_chunks[i].gzip_len + src_chunks[i].gzip_header_len + 8), f);
-    Write8(offset, f);
 
-    if (tgt_chunks[i].type == CHUNK_GZIP) {
-      Write8(src_chunks[i].len, f);
-      Write8(tgt_chunks[i].len, f);
-      Write4(tgt_chunks[i].level, f);
-      Write4(tgt_chunks[i].method, f);
-      Write4(tgt_chunks[i].windowBits, f);
-      Write4(tgt_chunks[i].memLevel, f);
-      Write4(tgt_chunks[i].strategy, f);
-      Write4(tgt_chunks[i].gzip_header_len, f);
-      fwrite(tgt_chunks[i].gzip_header, 1, tgt_chunks[i].gzip_header_len, f);
-      fwrite(tgt_chunks[i].gzip_footer, 1, GZIP_FOOTER_LEN, f);
+    switch (tgt_chunks[i].type) {
+      case CHUNK_NORMAL:
+        printf("chunk %3d: normal   (%10d, %10d)  %10d\n", i,
+               tgt_chunks[i].start, tgt_chunks[i].len, patch_size[i]);
+        Write8(tgt_chunks[i].source_start, f);
+        Write8(tgt_chunks[i].source_len, f);
+        Write8(offset, f);
+        offset += patch_size[i];
+        break;
+
+      case CHUNK_DEFLATE:
+        printf("chunk %3d: deflate  (%10d, %10d)  %10d  %s\n", i,
+               tgt_chunks[i].start, tgt_chunks[i].deflate_len, patch_size[i],
+               tgt_chunks[i].filename);
+        Write8(tgt_chunks[i].source_start, f);
+        Write8(tgt_chunks[i].source_len, f);
+        Write8(offset, f);
+        Write8(tgt_chunks[i].source_uncompressed_len, f);
+        Write8(tgt_chunks[i].len, f);
+        Write4(tgt_chunks[i].level, f);
+        Write4(tgt_chunks[i].method, f);
+        Write4(tgt_chunks[i].windowBits, f);
+        Write4(tgt_chunks[i].memLevel, f);
+        Write4(tgt_chunks[i].strategy, f);
+        offset += patch_size[i];
+        break;
+
+      case CHUNK_RAW:
+        printf("chunk %3d: raw      (%10d, %10d)\n", i,
+               tgt_chunks[i].start, tgt_chunks[i].len);
+        Write4(patch_size[i], f);
+        fwrite(patch_data[i], 1, patch_size[i], f);
+        break;
     }
-
-    offset += patch_size[i];
   }
 
   // Append each chunk's bsdiff patch, in order.
 
   for (i = 0; i < num_tgt_chunks; ++i) {
-    fwrite(patch_data[i], 1, patch_size[i], f);
+    if (tgt_chunks[i].type != CHUNK_RAW) {
+      fwrite(patch_data[i], 1, patch_size[i], f);
+    }
   }
 
   fclose(f);
diff --git a/tools/applypatch/imgdiff.h b/tools/applypatch/imgdiff.h
index 7ec45c5..f2069b4 100644
--- a/tools/applypatch/imgdiff.h
+++ b/tools/applypatch/imgdiff.h
@@ -15,8 +15,10 @@
  */
 
 // Image patch chunk types
-#define CHUNK_NORMAL 0
-#define CHUNK_GZIP   1
+#define CHUNK_NORMAL   0
+#define CHUNK_GZIP     1   // version 1 only
+#define CHUNK_DEFLATE  2   // version 2 only
+#define CHUNK_RAW      3   // version 2 only
 
 // The gzip header size is actually variable, but we currently don't
 // support gzipped data with any of the optional fields, so for now it
diff --git a/tools/applypatch/imgdiff_test.sh b/tools/applypatch/imgdiff_test.sh
new file mode 100755
index 0000000..dcdb922
--- /dev/null
+++ b/tools/applypatch/imgdiff_test.sh
@@ -0,0 +1,118 @@
+#!/bin/bash
+#
+# A script for testing imgdiff/applypatch.  It takes two full OTA
+# packages as arguments.  It generates (on the host) patches for all
+# the zip/jar/apk files they have in common, as well as boot and
+# recovery images.  It then applies the patches on the device (or
+# emulator) and checks that the resulting file is correct.
+
+EMULATOR_PORT=5580
+
+# set to 0 to use a device instead
+USE_EMULATOR=0
+
+# where on the device to do all the patching.
+WORK_DIR=/data/local/tmp
+
+START_OTA_PACKAGE=$1
+END_OTA_PACKAGE=$2
+
+# ------------------------
+
+tmpdir=$(mktemp -d)
+
+if [ "$USE_EMULATOR" == 1 ]; then
+  emulator -wipe-data -noaudio -no-window -port $EMULATOR_PORT &
+  pid_emulator=$!
+  ADB="adb -s emulator-$EMULATOR_PORT "
+else
+  ADB="adb -d "
+fi
+
+echo "waiting to connect to device"
+$ADB wait-for-device
+
+# run a command on the device; exit with the exit status of the device
+# command.
+run_command() {
+  $ADB shell "$@" \; echo \$? | awk '{if (b) {print a}; a=$0; b=1} END {exit a}'
+}
+
+testname() {
+  echo
+  echo "$1"...
+  testname="$1"
+}
+
+fail() {
+  echo
+  echo FAIL: $testname
+  echo
+  [ "$open_pid" == "" ] || kill $open_pid
+  [ "$pid_emulator" == "" ] || kill $pid_emulator
+  exit 1
+}
+
+sha1() {
+  sha1sum $1 | awk '{print $1}'
+}
+
+size() {
+  stat -c %s $1 | tr -d '\n'
+}
+
+cleanup() {
+  # not necessary if we're about to kill the emulator, but nice for
+  # running on real devices or already-running emulators.
+  testname "removing test files"
+  run_command rm $WORK_DIR/applypatch
+  run_command rm $WORK_DIR/source
+  run_command rm $WORK_DIR/target
+  run_command rm $WORK_DIR/patch
+
+  [ "$pid_emulator" == "" ] || kill $pid_emulator
+
+  rm -rf $tmpdir
+}
+
+$ADB push $ANDROID_PRODUCT_OUT/system/bin/applypatch $WORK_DIR/applypatch
+
+patch_and_apply() {
+  local fn=$1
+  shift
+
+  unzip -p $START_OTA_PACKAGE $fn > $tmpdir/source
+  unzip -p $END_OTA_PACKAGE $fn > $tmpdir/target
+  imgdiff "$@" $tmpdir/source $tmpdir/target $tmpdir/patch
+  bsdiff $tmpdir/source $tmpdir/target $tmpdir/patch.bs
+  echo "patch for $fn is $(size $tmpdir/patch) [of $(size $tmpdir/target)] ($(size $tmpdir/patch.bs) with bsdiff)"
+  echo "$fn $(size $tmpdir/patch) of $(size $tmpdir/target) bsdiff $(size $tmpdir/patch.bs)" >> /tmp/stats.txt
+  $ADB push $tmpdir/source $WORK_DIR/source || fail "source push failed"
+  run_command rm /data/local/tmp/target
+  $ADB push $tmpdir/patch $WORK_DIR/patch || fail "patch push failed"
+  run_command /data/local/tmp/applypatch /data/local/tmp/source \
+    /data/local/tmp/target $(sha1 $tmpdir/target) $(size $tmpdir/target) \
+    $(sha1 $tmpdir/source):/data/local/tmp/patch \
+    || fail "applypatch of $fn failed"
+  $ADB pull /data/local/tmp/target $tmpdir/result
+  diff -q $tmpdir/target $tmpdir/result || fail "patch output not correct!"
+}
+
+# --------------- basic execution ----------------------
+
+for i in $((zipinfo -1 $START_OTA_PACKAGE; zipinfo -1 $END_OTA_PACKAGE) | \
+           sort | uniq -d | egrep -e '[.](apk|jar|zip)$'); do
+  patch_and_apply $i -z
+done
+patch_and_apply boot.img
+patch_and_apply system/recovery.img
+
+
+# --------------- cleanup ----------------------
+
+cleanup
+
+echo
+echo PASS
+echo
+
diff --git a/tools/applypatch/imgpatch.c b/tools/applypatch/imgpatch.c
index 2efe874..697cc68 100644
--- a/tools/applypatch/imgpatch.c
+++ b/tools/applypatch/imgpatch.c
@@ -27,24 +27,7 @@
 #include "mincrypt/sha.h"
 #include "applypatch.h"
 #include "imgdiff.h"
-
-int Read4(unsigned char* p) {
-  return (int)(((unsigned int)p[3] << 24) |
-               ((unsigned int)p[2] << 16) |
-               ((unsigned int)p[1] << 8) |
-               (unsigned int)p[0]);
-}
-
-long long Read8(unsigned char* p) {
-  return (long long)(((unsigned long long)p[7] << 56) |
-                     ((unsigned long long)p[6] << 48) |
-                     ((unsigned long long)p[5] << 40) |
-                     ((unsigned long long)p[4] << 32) |
-                     ((unsigned long long)p[3] << 24) |
-                     ((unsigned long long)p[2] << 16) |
-                     ((unsigned long long)p[1] << 8) |
-                     (unsigned long long)p[0]);
-}
+#include "utils.h"
 
 /*
  * Apply the patch given in 'patch_filename' to the source data given
@@ -67,7 +50,10 @@
     return -1;
   }
 
-  if (memcmp(header, "IMGDIFF1", 8) != 0) {
+  // IMGDIFF1 uses CHUNK_NORMAL and CHUNK_GZIP.
+  // IMGDIFF2 uses CHUNK_NORMAL, CHUNK_DEFLATE, and CHUNK_RAW.
+  if (memcmp(header, "IMGDIFF", 7) != 0 ||
+      (header[7] != '1' && header[7] != '2')) {
     fprintf(stderr, "corrupt patch file header (magic number)\n");
     return -1;
   }
@@ -76,48 +62,67 @@
 
   int i;
   for (i = 0; i < num_chunks; ++i) {
-    // each chunk's header record starts with 28 bytes (4 + 8*3).
-    unsigned char chunk[28];
-    if (fread(chunk, 1, 28, f) != 28) {
+    // each chunk's header record starts with 4 bytes.
+    unsigned char chunk[4];
+    if (fread(chunk, 1, 4, f) != 4) {
       fprintf(stderr, "failed to read chunk %d record\n", i);
       return -1;
     }
 
     int type = Read4(chunk);
-    size_t src_start = Read8(chunk+4);
-    size_t src_len = Read8(chunk+12);
-    size_t patch_offset = Read8(chunk+20);
 
     if (type == CHUNK_NORMAL) {
+      unsigned char normal_header[24];
+      if (fread(normal_header, 1, 24, f) != 24) {
+        fprintf(stderr, "failed to read chunk %d normal header data\n", i);
+        return -1;
+      }
+
+      size_t src_start = Read8(normal_header);
+      size_t src_len = Read8(normal_header+8);
+      size_t patch_offset = Read8(normal_header+16);
+
       fprintf(stderr, "CHUNK %d:  normal   patch offset %d\n", i, patch_offset);
 
       ApplyBSDiffPatch(old_data + src_start, src_len,
                        patch_filename, patch_offset,
                        output, ctx);
     } else if (type == CHUNK_GZIP) {
-      fprintf(stderr, "CHUNK %d:  gzip     patch offset %d\n", i, patch_offset);
+      // This branch is basically a duplicate of the CHUNK_DEFLATE
+      // branch, with a bit of extra processing for the gzip header
+      // and footer.  I've avoided factoring the common code out since
+      // this branch will just be deleted when we drop support for
+      // IMGDIFF1.
 
-      // gzip chunks have an additional 40 + gzip_header_len + 8 bytes
+      // gzip chunks have an additional 64 + gzip_header_len + 8 bytes
       // in their chunk header.
-      unsigned char* gzip = malloc(40);
-      if (fread(gzip, 1, 40, f) != 40) {
-        fprintf(stderr, "failed to read chunk %d initial gzip data\n", i);
+      unsigned char* gzip = malloc(64);
+      if (fread(gzip, 1, 64, f) != 64) {
+        fprintf(stderr, "failed to read chunk %d initial gzip header data\n",
+                i);
         return -1;
       }
-      size_t gzip_header_len = Read4(gzip+36);
-      gzip = realloc(gzip, 40 + gzip_header_len + 8);
-      if (fread(gzip+40, 1, gzip_header_len+8, f) != gzip_header_len+8) {
-        fprintf(stderr, "failed to read chunk %d remaining gzip data\n", i);
+      size_t gzip_header_len = Read4(gzip+60);
+      gzip = realloc(gzip, 64 + gzip_header_len + 8);
+      if (fread(gzip+64, 1, gzip_header_len+8, f) != gzip_header_len+8) {
+        fprintf(stderr, "failed to read chunk %d remaining gzip header data\n",
+                i);
         return -1;
       }
 
-      size_t expanded_len = Read8(gzip);
-      size_t target_len = Read8(gzip);
-      int gz_level = Read4(gzip+16);
-      int gz_method = Read4(gzip+20);
-      int gz_windowBits = Read4(gzip+24);
-      int gz_memLevel = Read4(gzip+28);
-      int gz_strategy = Read4(gzip+32);
+      size_t src_start = Read8(gzip);
+      size_t src_len = Read8(gzip+8);
+      size_t patch_offset = Read8(gzip+16);
+
+      size_t expanded_len = Read8(gzip+24);
+      size_t target_len = Read8(gzip+32);
+      int gz_level = Read4(gzip+40);
+      int gz_method = Read4(gzip+44);
+      int gz_windowBits = Read4(gzip+48);
+      int gz_memLevel = Read4(gzip+52);
+      int gz_strategy = Read4(gzip+56);
+
+      fprintf(stderr, "CHUNK %d:  gzip     patch offset %d\n", i, patch_offset);
 
       // Decompress the source data; the chunk header tells us exactly
       // how big we expect it to be when decompressed.
@@ -173,8 +178,8 @@
       // Now compress the target data and append it to the output.
 
       // start with the gzip header.
-      fwrite(gzip+40, 1, gzip_header_len, output);
-      SHA_update(ctx, gzip+40, gzip_header_len);
+      fwrite(gzip+64, 1, gzip_header_len, output);
+      SHA_update(ctx, gzip+64, gzip_header_len);
 
       // we're done with the expanded_source data buffer, so we'll
       // reuse that memory to receive the output of deflate.
@@ -212,12 +217,143 @@
       deflateEnd(&strm);
 
       // lastly, the gzip footer.
-      fwrite(gzip+40+gzip_header_len, 1, 8, output);
-      SHA_update(ctx, gzip+40+gzip_header_len, 8);
+      fwrite(gzip+64+gzip_header_len, 1, 8, output);
+      SHA_update(ctx, gzip+64+gzip_header_len, 8);
 
       free(temp_data);
       free(uncompressed_target_data);
       free(gzip);
+    } else if (type == CHUNK_RAW) {
+      unsigned char raw_header[4];
+      if (fread(raw_header, 1, 4, f) != 4) {
+        fprintf(stderr, "failed to read chunk %d raw header data\n", i);
+        return -1;
+      }
+
+      size_t data_len = Read4(raw_header);
+
+      fprintf(stderr, "CHUNK %d:  raw      data %d\n", i, data_len);
+
+      unsigned char* temp = malloc(data_len);
+      if (fread(temp, 1, data_len, f) != data_len) {
+          fprintf(stderr, "failed to read chunk %d raw data\n", i);
+          return -1;
+      }
+      SHA_update(ctx, temp, data_len);
+      if (fwrite(temp, 1, data_len, output) != data_len) {
+          fprintf(stderr, "failed to write chunk %d raw data\n", i);
+          return -1;
+      }
+    } else if (type == CHUNK_DEFLATE) {
+      // deflate chunks have an additional 60 bytes in their chunk header.
+      unsigned char deflate_header[60];
+      if (fread(deflate_header, 1, 60, f) != 60) {
+        fprintf(stderr, "failed to read chunk %d deflate header data\n", i);
+        return -1;
+      }
+
+      size_t src_start = Read8(deflate_header);
+      size_t src_len = Read8(deflate_header+8);
+      size_t patch_offset = Read8(deflate_header+16);
+      size_t expanded_len = Read8(deflate_header+24);
+      size_t target_len = Read8(deflate_header+32);
+      int level = Read4(deflate_header+40);
+      int method = Read4(deflate_header+44);
+      int windowBits = Read4(deflate_header+48);
+      int memLevel = Read4(deflate_header+52);
+      int strategy = Read4(deflate_header+56);
+
+      fprintf(stderr, "CHUNK %d:  deflate  patch offset %d\n", i, patch_offset);
+
+      // Decompress the source data; the chunk header tells us exactly
+      // how big we expect it to be when decompressed.
+
+      unsigned char* expanded_source = malloc(expanded_len);
+      if (expanded_source == NULL) {
+        fprintf(stderr, "failed to allocate %d bytes for expanded_source\n",
+                expanded_len);
+        return -1;
+      }
+
+      z_stream strm;
+      strm.zalloc = Z_NULL;
+      strm.zfree = Z_NULL;
+      strm.opaque = Z_NULL;
+      strm.avail_in = src_len;
+      strm.next_in = (unsigned char*)(old_data + src_start);
+      strm.avail_out = expanded_len;
+      strm.next_out = expanded_source;
+
+      int ret;
+      ret = inflateInit2(&strm, -15);
+      if (ret != Z_OK) {
+        fprintf(stderr, "failed to init source inflation: %d\n", ret);
+        return -1;
+      }
+
+      // Because we've provided enough room to accommodate the output
+      // data, we expect one call to inflate() to suffice.
+      ret = inflate(&strm, Z_SYNC_FLUSH);
+      if (ret != Z_STREAM_END) {
+        fprintf(stderr, "source inflation returned %d\n", ret);
+        return -1;
+      }
+      // We should have filled the output buffer exactly.
+      if (strm.avail_out != 0) {
+        fprintf(stderr, "source inflation short by %d bytes\n", strm.avail_out);
+        return -1;
+      }
+      inflateEnd(&strm);
+
+      // Next, apply the bsdiff patch (in memory) to the uncompressed
+      // data.
+      unsigned char* uncompressed_target_data;
+      ssize_t uncompressed_target_size;
+      if (ApplyBSDiffPatchMem(expanded_source, expanded_len,
+                              patch_filename, patch_offset,
+                              &uncompressed_target_data,
+                              &uncompressed_target_size) != 0) {
+        return -1;
+      }
+
+      // Now compress the target data and append it to the output.
+
+      // we're done with the expanded_source data buffer, so we'll
+      // reuse that memory to receive the output of deflate.
+      unsigned char* temp_data = expanded_source;
+      ssize_t temp_size = expanded_len;
+      if (temp_size < 32768) {
+        // ... unless the buffer is too small, in which case we'll
+        // allocate a fresh one.
+        free(temp_data);
+        temp_data = malloc(32768);
+        temp_size = 32768;
+      }
+
+      // now the deflate stream
+      strm.zalloc = Z_NULL;
+      strm.zfree = Z_NULL;
+      strm.opaque = Z_NULL;
+      strm.avail_in = uncompressed_target_size;
+      strm.next_in = uncompressed_target_data;
+      ret = deflateInit2(&strm, level, method, windowBits, memLevel, strategy);
+      do {
+        strm.avail_out = temp_size;
+        strm.next_out = temp_data;
+        ret = deflate(&strm, Z_FINISH);
+        size_t have = temp_size - strm.avail_out;
+
+        if (fwrite(temp_data, 1, have, output) != have) {
+          fprintf(stderr, "failed to write %d compressed bytes to output\n",
+                  have);
+          return -1;
+        }
+        SHA_update(ctx, temp_data, have);
+      } while (ret != Z_STREAM_END);
+      deflateEnd(&strm);
+
+      free(temp_data);
+      free(uncompressed_target_data);
     } else {
       fprintf(stderr, "patch chunk %d is unknown type %d\n", i, type);
       return -1;
diff --git a/tools/applypatch/utils.c b/tools/applypatch/utils.c
new file mode 100644
index 0000000..912229b
--- /dev/null
+++ b/tools/applypatch/utils.c
@@ -0,0 +1,62 @@
+/*
+ * Copyright (C) 2009 The Android Open Source Project
+ *
+ * Licensed under the Apache License, Version 2.0 (the "License");
+ * you may not use this file except in compliance with the License.
+ * You may obtain a copy of the License at
+ *
+ *      http://www.apache.org/licenses/LICENSE-2.0
+ *
+ * Unless required by applicable law or agreed to in writing, software
+ * distributed under the License is distributed on an "AS IS" BASIS,
+ * WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.
+ * See the License for the specific language governing permissions and
+ * limitations under the License.
+ */
+
+#include <stdio.h>
+
+#include "utils.h"
+
+/** Write a 4-byte value to f in little-endian order. */
+void Write4(int value, FILE* f) {
+  fputc(value & 0xff, f);
+  fputc((value >> 8) & 0xff, f);
+  fputc((value >> 16) & 0xff, f);
+  fputc((value >> 24) & 0xff, f);
+}
+
+/** Write an 8-byte value to f in little-endian order. */
+void Write8(long long value, FILE* f) {
+  fputc(value & 0xff, f);
+  fputc((value >> 8) & 0xff, f);
+  fputc((value >> 16) & 0xff, f);
+  fputc((value >> 24) & 0xff, f);
+  fputc((value >> 32) & 0xff, f);
+  fputc((value >> 40) & 0xff, f);
+  fputc((value >> 48) & 0xff, f);
+  fputc((value >> 56) & 0xff, f);
+}
+
+int Read2(unsigned char* p) {
+  return (int)(((unsigned int)p[1] << 8) |
+               (unsigned int)p[0]);
+}
+
+int Read4(unsigned char* p) {
+  return (int)(((unsigned int)p[3] << 24) |
+               ((unsigned int)p[2] << 16) |
+               ((unsigned int)p[1] << 8) |
+               (unsigned int)p[0]);
+}
+
+long long Read8(unsigned char* p) {
+  return (long long)(((unsigned long long)p[7] << 56) |
+                     ((unsigned long long)p[6] << 48) |
+                     ((unsigned long long)p[5] << 40) |
+                     ((unsigned long long)p[4] << 32) |
+                     ((unsigned long long)p[3] << 24) |
+                     ((unsigned long long)p[2] << 16) |
+                     ((unsigned long long)p[1] << 8) |
+                     (unsigned long long)p[0]);
+}
diff --git a/tools/applypatch/utils.h b/tools/applypatch/utils.h
new file mode 100644
index 0000000..d6d6f1d
--- /dev/null
+++ b/tools/applypatch/utils.h
@@ -0,0 +1,30 @@
+/*
+ * Copyright (C) 2009 The Android Open Source Project
+ *
+ * Licensed under the Apache License, Version 2.0 (the "License");
+ * you may not use this file except in compliance with the License.
+ * You may obtain a copy of the License at
+ *
+ *      http://www.apache.org/licenses/LICENSE-2.0
+ *
+ * Unless required by applicable law or agreed to in writing, software
+ * distributed under the License is distributed on an "AS IS" BASIS,
+ * WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.
+ * See the License for the specific language governing permissions and
+ * limitations under the License.
+ */
+
+#ifndef _BUILD_TOOLS_APPLYPATCH_UTILS_H
+#define _BUILD_TOOLS_APPLYPATCH_UTILS_H
+
+#include <stdio.h>
+
+// Read and write little-endian values of various sizes.
+
+void Write4(int value, FILE* f);
+void Write8(long long value, FILE* f);
+int Read2(unsigned char* p);
+int Read4(unsigned char* p);
+long long Read8(unsigned char* p);
+
+#endif //  _BUILD_TOOLS_APPLYPATCH_UTILS_H